USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

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Searching in 'USC-OGP 2-DE database' for entry matching: SERC_HUMAN USC-OGP 2-DE database:  SERC_HUMAN SERC_HUMAN General information about the entry View entry in simple text format Entry name SERC_HUMAN Primary accession number Q9Y617 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Phosphoserine aminotransferase; EC=2.6.1.52; AltName: Full=Phosphohydroxythreonine aminotransferase; Short=PSAT;. Gene name Name=PSAT1 Synonyms=PSA Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1200: pI=7.15; Mw=39675 Cross-references UniProtKB/Swiss-Prot Q9Y617; SERC_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name SERC_HUMAN Primary accession number Q9Y617 Secondary accession number(s) Q5T7G5 Q5T7G6 Q96AW2 Q9BQ12 Sequence was last modified on  January 23, 2002 (version 2) Annotations were last modified on  March 15, 2017 (version 178) Name and origin of the protein Description RecName: Full=Phosphoserine aminotransferase; EC=2.6.1.52; AltName: Full=Phosphohydroxythreonine aminotransferase; Short=PSAT; Gene name Name=PSAT1 Synonyms=PSA Encoded on Name=PSAT1; Synonyms=PSA Keywords 3D-structure; Acetylation; Alternative splicing; Amino-acid biosynthesis; Aminotransferase; Complete proteome; Disease mutation; Phosphoprotein; Polymorphism; Pyridoxal phosphate; Reference proteome; Serine biosynthesis; Transferase. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF113132; AAD42052.1; -; mRNA EMBL AY131232; AAN71736.1; -; mRNA EMBL BT006840; AAP35486.1; -; mRNA EMBL AL353594; CAI16882.1; -; Genomic_DNA EMBL AL353594; CAI16883.1; -; Genomic_DNA EMBL CH471089; EAW62621.1; -; Genomic_DNA EMBL CH471089; EAW62617.1; -; Genomic_DNA EMBL BC000971; AAH00971.1; -; mRNA EMBL BC004863; AAH04863.1; -; mRNA EMBL BC016645; AAH16645.1; -; mRNA EMBL BC018129; AAH18129.1; -; mRNA CCDS CCDS6659.1; -. [Q9Y617-2]; . CCDS CCDS6660.1; -. [Q9Y617-1]; . RefSeq NP_066977.1; NM_021154.4. [Q9Y617-2]; . RefSeq NP_478059.1; NM_058179.3. [Q9Y617-1]; . UniGene Hs.494261; -; . PDB 3E77; X-ray; 2.50 A; A/B/C=17-370 PDBsum 3E77; -; . ProteinModelPortal Q9Y617; -; . SMR Q9Y617; -; . BioGrid 119001; 37; . IntAct Q9Y617; 3; . MINT MINT-1490243; -; . STRING 9606.ENSP00000365773; -; . DrugBank DB00142; L-Glutamic Acid; . DrugBank DB00114; Pyridoxal Phosphate; . iPTMnet Q9Y617; -; . PhosphoSitePlus Q9Y617; -; . SwissPalm Q9Y617; -; . DMDM 20141815; -; . REPRODUCTION-2DPAGE IPI00001734; -; . EPD Q9Y617; -; . PaxDb Q9Y617; -; . PeptideAtlas Q9Y617; -; . PRIDE Q9Y617; -; . DNASU 29968; -; . Ensembl ENST00000347159; ENSP00000317606; ENSG00000135069. [Q9Y617-2]; . Ensembl ENST00000376588; ENSP00000365773; ENSG00000135069. [Q9Y617-1]; . GeneID 29968; -; . KEGG hsa:29968; -; . UCSC uc004ala.5; human. [Q9Y617-1]; . CTD 29968; -; . DisGeNET 29968; -; . GeneCards PSAT1; -; . HGNC HGNC:19129; PSAT1; . HPA CAB014882; -; . HPA CAB040567; -; . HPA HPA042924; -; . MalaCards PSAT1; -; . MIM 610936; gene; . MIM 610992; phenotype; . MIM 616038; phenotype; . neXtProt NX_Q9Y617; -; . OpenTargets ENSG00000135069; -; . Orphanet 2671; Neu-Laxova syndrome; . Orphanet 284417; Phosphoserine aminotransferase deficiency; . PharmGKB PA128395782; -; . eggNOG KOG2790; Eukaryota; . eggNOG COG1932; LUCA; . GeneTree ENSGT00390000015177; -; . HOGENOM HOG000088965; -; . HOVERGEN HBG001218; -; . InParanoid Q9Y617; -; . KO K00831; -; . OMA GAQKNMG; -; . OrthoDB EOG091G0964; -; . PhylomeDB Q9Y617; -; . TreeFam TF312975; -; . BioCyc MetaCyc:HS05946-MONOMER; -; . BRENDA 2.6.1.52; 2681; . Reactome R-HSA-977347; Serine biosynthesis; . UniPathway UPA00135; UER00197; . UniPathway UPA00244; UER00311; . ChiTaRS PSAT1; human; . EvolutionaryTrace Q9Y617; -; . GeneWiki PSAT1; -; . GenomeRNAi 29968; -; . PRO PR:Q9Y617; -; . Proteomes UP000005640; Chromosome 9; . Bgee ENSG00000135069; -; . CleanEx HS_PSAT1; -; . ExpressionAtlas Q9Y617; baseline and differential; . Genevisible Q9Y617; HS; . GO GO:0005737; C:cytoplasm; IBA:GO_Central; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0004648; F:O-phospho-L-serine:2-oxoglutarate aminotransferase activity; NAS:UniProtKB; . GO GO:0006564; P:L-serine biosynthetic process; NAS:UniProtKB; . GO GO:0008615; P:pyridoxine biosynthetic process; NAS:UniProtKB; . CDD cd00611; PSAT_like; 1; . Gene3D 3.40.640.10; -; 1; . Gene3D 3.90.1150.10; -; 1; . HAMAP MF_00160; SerC_aminotrans_5; 1; . InterPro IPR000192; Aminotrans_V_dom; . InterPro IPR020578; Aminotrans_V_PyrdxlP_BS; . InterPro IPR022278; Pser_aminoTfrase; . InterPro IPR015424; PyrdxlP-dep_Trfase; . InterPro IPR015421; PyrdxlP-dep_Trfase_major_sub1; . InterPro IPR015422; PyrdxlP-dep_Trfase_major_sub2; . Pfam PF00266; Aminotran_5; 1; . PIRSF PIRSF000525; SerC; 1; . SUPFAM SSF53383; SSF53383; 1; . TIGRFAMs TIGR01364; serC_1; 1; . PROSITE PS00595; AA_TRANSFER_CLASS_5; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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